Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M16 RNAprocessing Mitochondrion_UniqueNum	BreastC_M16 RNAprocessing Mitochondrion_pVal	BreastC_M16 RNAprocessing Mitochondrion_Unique	ColonC_M15 Chr14q_UniqueNum	ColonC_M15 Chr14q_pVal	ColonC_M15 Chr14q_Unique
AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP	0		9.97560909449e-05	34	0.000146152296557	AP2S1|BAX|CNOT3|CNPY3|DMPK|EPN1|GRWD1|GYS1|INTS1|KDELR1|MAD1L1|MAFK|MBOAT7|MRPS12|NFKBIB|NOSIP|NR1H2|NUCB1|NUDC|PAF1|PAK4|PPP1R13L|PSMD8|RUVBL2|SIRT2|SIX5|SLC1A5|SMURF1|SNRPD2|STRN4|TSEN34|U2AF2|ZNF444|ZNF580	16	5.33598853328e-05	ACTR10|AP4S1|ARHGAP5|DLGAP5|EAPP|EXOC5|FBXO34|HEXIM1|HNRNPL|KTN1|MAPK1IP1L|PLEKHG3|SCFD1|SNAPC1|SNX6|WDHD1
GCCATNTTG_YY1_Q6	1	RPN1	0.00030773556146	41	0.000601718603726	AGPAT1|AP3D1|CNOT3|DYRK1B|EIF2B4|FBXL18|FKRP|GBF1|IDH3G|ILF3|IRAK1|LYPLA2|MRPL11|NCDN|NDUFB11|NFYA|NFYC|NUDT3|PCIF1|PRICKLE3|PRKCSH|RBM10|RNF5|RPS8|RXRB|SAFB|SLC39A7|SMYD5|STRN4|SZRD1|TJAP1|U2AF2|UBA1|UBE2J2|UBIAD1|UBXN11|WDR13|WIPI2|YBX1|ZNF335|ZNF668	20	1.3752519194e-05	AP4S1|CCNB1IP1|CCNK|CIPC|CPSF2|DYNC1H1|EIF5|HNRNPC|MARK3|NDUFB1|PYM1|RBMX|SEC23A|SETD3|SPCS2|STRN3|SYNE2|TET2|TMED10|USF1
GCM_NF2	0		0.000457837610368	38	1.11020819805e-05	AARS2|ABHD16A|AP2A1|B4GALT2|C21ORF33|CIZ1|CNPPD1|DBNL|EIF4EBP2|EPS15L1|EVI5L|IDH3G|KIAA2013|KLHL17|LINC01278|MAP6|MAPK8IP1|MBD3|MFN2|NCLN|PRRC2B|RETREG2|RNF216|RPL7L1|RSC1A1|RTBDN|SAFB|SAMD4B|STRN4|SUV39H1|TBC1D22B|TEX261|TNPO2|TSEN34|URGCP|VPS52|VRK3|WBP2	14	0.000904573138756	ACTR10|ATG2B|ERG28|FNTB|GTF2A1|HECTD1|JKAMP|METTL17|NAA30|PIP4P1|SUMF2|TINF2|TOX4|UBR7
GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN	2	PCNX3|SRPRB	4.4057514474e-05	72	2.07883530864e-05	ALG3|BCS1L|BRAT1|BYSL|C6ORF136|C20ORF27|CDK16|COPS7A|CPTP|DHDDS|DHPS|DMAC2|DNAJB12|DTNBP1|ENOX2|EXOSC5|FLOT1|GNA12|GNL1|GORASP2|GTPBP2|GYS1|HCFC1|HPS1|HSPBP1|ILF3|KEAP1|KRI1|MBD3|MED16|NEURL4|NFIC|NFYC|PBX2|PEX14|PLD2|PLEKHG5|POLR1A|POLR2I|POLR3A|PQBP1|PRMT2|PRPF31|PSENEN|RAD23A|RASSF1|RAVER1|RBM10|RFXANK|RHBDD1|RPL41|RPP21|RSC1A1|SCAMP4|SHKBP1|SLC39A3|SMYD5|SPTAN1|SUV39H1|TBC1D17|TBRG4|THOP1|TIMM44|TMEM161A|TOE1|USE1|VRK3|WDR13|ZFAND3|ZKSCAN3|ZNF142|ZNRD1	27	6.73266758615e-05	ACIN1|APEX1|ARF6|ARHGAP5|BCL2L2|CHAC2|ERG28|FANCM|GCNT1|GEMIN2|GMFB|GNPNAT1|HNRNPL|MAP4K5|MDP1|MRPL19|NUTF2|OCEL1|PAPOLA|PARP2|PPP4R3A|SNRNP40|TDP1|TIMM9|TRIP11|TTC8|VTI1B
GSE9006_TYPE_1_DIABETES_AT_DX_VS_1MONTH_POST_DX_PBMC_UP	3	COPG1|RAB8A|RPN1	3.15214415726e-05	26	1.10342909455e-05	ABCF1|ABCF3|AGPAT3|ARAF|BSG|CCDC22|CDC37|ECSIT|FARSA|FZR1|KDELR2|MFN2|NFYA|NSD1|P4HB|RABAC1|RBM42|REX1BD|RRP12|SAFB|SLC39A7|TMEM160|TMEM259|WDR18|WDR46|XAB2	10	5.20085921998e-05	ARF6|ARPC4|CDCA4|CDK9|LSM12|OSTF1|PPP4R3A|RBBP4|SNRNP40|STT3A
Human Lymphoma_Tome05_1333genes (16081686-SuppTable4)	0		0.00036571490513	60	0.000664300564712	ABT1|AKT2|ARRDC2|AUP1|BAG6|BRD4|BRPF3|CAD|CALR|CCDC86|CDC37|CLPP|COPE|CSNK1G2|CSNK2B|DBNL|EIF3B|EIF4G1|ERCC1|ERCC2|EXOSC5|FTSJ1|GLO1|GPKOW|HCFC1|HDAC1|HMGN2|ILF3|KDELR1|KEAP1|KHSRP|LRRC47|LSM2|MAD2L1BP|MLF2|MRPL11|MYO9B|NADK|NDUFB7|NELFE|NHP2|NPM3|NUP210|PKN1|POLR1C|PPP2R1A|PRELID1|PRKCSH|PRPF31|RAD23A|RUVBL2|SAFB|SZRD1|TBRG4|THOP1|TIMM44|TRIM26|UBA1|UROS|YIF1B	26	6.71292455489e-05	AKT1|AP1G2|APEX1|ATP2C1|ATP5S|CALM1|CDK9|CDKN3|DAD1|EIF5|ERG28|EXOC5|G2E3|HNRNPC|HSP90AA1|LRR1|MLH3|MNAT1|MRPL19|MTHFD1|PNP|RBBP4|SNW1|SSR3|TTC5|YY1
MORF_PPP1CA	0		0.000457580795277	23	0.000194498163849	AP2M1|AP2S1|ARHGDIA|C21ORF33|COPE|COX6B1|CSNK2B|DAP|DDX49|HDAC1|HNRNPAB|HNRNPUL1|HSD17B10|PARK7|POLR2I|PPP2R1A|PSMD8|RER1|SNRPD2|TECR|TMEM147|TRIM28|UBA1	10	0.000720663426704	HNRNPC|HSP90AA1|NEDD8|PSMA3|PSMC1|PSMC6|RBMX|RPL36AL|VTI1B|YY1
MORF_SKP1A	0		0.000342461769419	25	0.000471492872203	AP2M1|AP2S1|CALM3|COPE|COX6B1|CSNK2B|DAP|DDX49|HNRNPAB|HNRNPUL1|ILF3|MAD2L1BP|PARK7|PPP2R1A|PSMD8|RAC1|RAD23A|RER1|SEC13|TRIM28|U2AF1|UBA1|VPS52|WBP2|WIPI2	12	0.000213430666636	BAG5|GMFB|HNRNPC|HSP90AA1|NEDD8|PSMA3|PSMC1|PSMC6|RBMX|RPL36AL|VTI1B|YY1
PENG_LEUCINE_DEPRIVATION_DN	0		8.974865527e-05	26	6.2157639397e-05	BYSL|CAD|CALR|DNAJC11|EBP|EIF2B4|EIF4G1|EMD|FARSA|FKBP4|GCDH|GLO1|HSP90AB1|ILF3|MLF2|MRPS12|NOP16|POLRMT|PSMD2|RBM14|RNF126|SLC29A1|SPINT2|SRM|TMEM259|ZNF593	12	0.000117339671143	AHSA1|EIF2S1|EIF5|ERH|HSP90AA1|MTHFD1|NUTF2|PAPOLA|PIK3R3|PNP|PSMA3|VRK1
Proliferation_DLBCL	0		0.000229460047898	62	0.000378390128439	AKT2|AUP1|BAG6|BRD4|CAD|CALR|CCDC86|CDC37|CDK11A|CLPP|CNOT11|COPE|CSNK1G2|CSNK2B|EIF3B|EIF4G1|ERCC1|ERCC2|EXOSC5|FTSJ1|GIPC1|GLO1|HCFC1|HDAC1|HMGN2|IDH3G|ILF3|KDELR1|KEAP1|KHSRP|LRRC47|LSM2|MAD2L1BP|MLF2|MRPL11|MYO9B|NDUFB7|NELFE|NFYC|NHP2|NPM3|NUP210|PKN1|PMS2P5|POLR1C|PPP2R1A|PRELID1|PRKCSH|RAD23A|RUVBL2|SAFB|SAMD1|SFXN4|SZRD1|TBRG4|THOP1|TIMM44|TRIM26|UBA1|UBL5|UROS|YIF1B	26	8.05299673579e-05	AKT1|AP1G2|APEX1|ATP2C1|CDK9|CDKN3|DAD1|EIF5|ERG28|EXOC5|G2E3|HNRNPC|HSP90AA1|LRR1|LSM12|MNAT1|MRPL19|MTHFD1|PNP|RBBP4|SNW1|SSR3|SUPT16H|TMED10|TTC5|YY1
SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	1	PCNX3	0.000528347807096	50	0.000319426937255	AGO1|ARHGDIA|B4GALT2|BAHCC1|BCKDHA|BRD4|BSDC1|BTBD2|CALM3|CALR|CLPTM1|CNOT11|CSPG5|CUTA|EMC1|FKBP4|FURIN|GBF1|GIPC1|HIST1H2AB|HSP90AB1|ILF3|KDELR2|MACO1|MAGED1|MED25|MOV10|MYDGF|NFYA|NOC2L|NUDT3|P4HB|PHF13|PLIN3|PPIL1|PRKCSH|PSMC4|PSMD2|PTMS|PTOV1|RAD23A|RRP1|SHKBP1|SYN1|TBC1D17|TIMM17B|TXLNA|UQCC2|WASF2|ZNF628	19	0.000737268676937	ALYREF|ARPC4|CEP170B|CLTC|DNAJB11|HNRNPC|HNRNPL|MIA2|NAA30|OXCT1|PPP2R5E|PPP4R3A|RCOR1|SNW1|STRN3|TET2|TM9SF1|ZNF219|ZNF410
SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP	3	COPG1|RAB8A|RPN1	1.27674399925e-05	76	1.0355347732e-16	ACOT8|AES|APBA3|APEX2|AUP1|B4GALT2|BAX|CALR|CDK11A|CMC4|CNPPD1|CNPY3|COX6B1|CSK|CSNK1G2|DNAJC8|DVL1|EBP|EMD|ERCC1|FARSA|GIPC1|GNL1|GPX4|GRK6|HDAC1|HHLA3|KHSRP|MAD1L1|MAP2K2|MBD3|MBOAT7|MEA1|MLF2|MRM2|NDUFA3|NDUFA7|NDUFB7|NDUFB11|NUDT1|NUDT3|OAZ1|PARK7|PEX6|PEX14|PGLS|PIAS4|PIN1|PKN1|PNPLA6|POLR2I|POLRMT|PPAN|PQBP1|PRDX2|PRRC2A|RGS14|RPL36|RPS8|RRP1|S100A11|SAFB|SCLY|SF3A2|SGPL1|SGTA|SLC39A7|SMARCA4|SRF|STIM1|SUPT5H|TECR|UBL5|WRAP73|XRCC1|YBX1	19	2.55348799849e-05	ACYP1|ARPC4|ATXN3|CALM1|ERG28|ERH|FKBP3|HEXIM1|HNRNPL|NDUFB1|NUTF2|PCK2|PSMB5|RAP2B|RBBP4|SNRNP40|SPA17|STT3A|VRK1
YY1_Q6	1	RPN1	0.000143650013779	33	2.06392485414e-06	AP3D1|ATP13A1|B3GALT6|CNOT3|ECH1|FIZ1|FKRP|GBF1|IRAK1|LYPLA2|NCDN|NFYC|PCIF1|PRKCSH|RBM14|RPS8|RXRB|SLC39A7|SMYD5|STRN4|STX10|SZRD1|TJAP1|UBA1|UBE2J2|UBE4B|UBIAD1|UBXN11|WDR13|WIPI2|YBX1|ZNF335|ZNF524	12	0.000285236102703	CCNB1IP1|CCNK|DYNC1H1|EIF5|MARK3|PSMB5|PYM1|SETD3|SPCS2|TET2|USF1|YY1
transferase complex [GoID:GO:1990234; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	1	RPN1	0.000390007715183	65	0.000778954350294	ASB16|AUP1|BRPF1|BRPF3|BTBD2|CCND3|CCNQ|CUL7|DCAF15|DDA1|ERCC1|ERCC2|FBXL19|FBXO17|FBXO24|FBXO27|FZR1|GTF2F1|GTF2H4|HCFC1|HSPA1A|INTS1|KEAP1|KLHL17|KLHL21|KLHL35|KMT2B|MED10|MED12|MED18|MED20|MIB2|MMS19|MTOR|NAA10|OGDH|PAF1|PEF1|PFKL|PHC2|PIAS4|PIK3R2|PINK1|POLR1A|POLR1C|POLR2E|POLR2H|POLR2I|POLR3A|POLRMT|PRPF31|RING1|RNF8|RUVBL2|SESN2|SETD5|SNRPD2|SUPT3H|TAF12|TSPAN17|UBE2J2|UBE4B|ZDHHC9|ZNF335|ZNRD1	32	1.0610800714e-06	ATG14|BTBD6|CCNK|CDK9|CHD8|DAD1|DCAF4|DCAF5|DCAF11|DLST|ERH|FNTB|GAN|GTF2A1|KBTBD8|MBIP|MED6|MNAT1|NAA30|PIGH|PIK3R3|POLE2|PRMT5|RABGGTA|RBBP4|RBBP5|SEL1L|SNW1|SPTLC2|SPTSSA|STT3A|USF1
